Imported reference has a TypeError: arrayfilter()

TypeError: array_filter(): Argument #1 ($array) must be of type array, null given in array_filter() (line 223 of /var/www/html/modules/contrib/bibcite/modules/bibcite_entity/src/Normalizer/ReferenceNormalizerBase.php) #0 /var/www/html/modules/contrib/bibcite/modules/bibcite_entity/src/Normalizer/ReferenceNormalizerBase.php(223): array_filter() #1 /var/www/html/modules/contrib/bibcite/modules/bibcite_entity/src/Normalizer/ReferenceNormalizerBase.php(353): Drupal\bibcite_entity\Normalizer\ReferenceNormalizerBase->convertEntityType() #2 /var/www/html/modules/contrib/bibcite/modules/bibcite_entity/src/Normalizer/CslReferenceNormalizer.php(45): Drupal\bibcite_entity\Normalizer\ReferenceNormalizerBase->normalize() #3 /var/www/html/vendor/symfony/serializer/Serializer.php(153): Drupal\bibcite_entity\Normalizer\CslReferenceNormalizer->normalize() #4 /var/www/html/modules/contrib/bibcite/modules/bibcite_entity/src/ReferenceViewBuilder.php(85): Symfony\Component\Serializer\Serializer->normalize() #5 /var/www/html/core/lib/Drupal/Core/Entity/EntityViewBuilder.php(282): Drupal\bibcite_entity\ReferenceViewBuilder->buildComponents() #6 /var/www/html/core/lib/Drupal/Core/Entity/EntityViewBuilder.php(239): Drupal\Core\Entity\EntityViewBuilder->buildMultiple() #7 [internal function]: Drupal\Core\Entity\EntityViewBuilder->build() #8 /var/www/html/core/lib/Drupal/Core/Security/DoTrustedCallbackTrait.php(101): call_user_func_array() #9 /var/www/html/core/lib/Drupal/Core/Render/Renderer.php(788): Drupal\Core\Render\Renderer->doTrustedCallback() #10 /var/www/html/core/lib/Drupal/Core/Render/Renderer.php(374): Drupal\Core\Render\Renderer->doCallback() #11 /var/www/html/core/lib/Drupal/Core/Render/Renderer.php(204): Drupal\Core\Render\Renderer->doRender() #12 /var/www/html/core/lib/Drupal/Core/Render/MainContent/HtmlRenderer.php(242): Drupal\Core\Render\Renderer->render() #13 /var/www/html/core/lib/Drupal/Core/Render/Renderer.php(580): Drupal\Core\Render\MainContent\HtmlRenderer->Drupal\Core\Render\MainContent\{closure}() #14 /var/www/html/core/lib/Drupal/Core/Render/MainContent/HtmlRenderer.php(243): Drupal\Core\Render\Renderer->executeInRenderContext() #15 /var/www/html/core/lib/Drupal/Core/Render/MainContent/HtmlRenderer.php(132): Drupal\Core\Render\MainContent\HtmlRenderer->prepare() #16 /var/www/html/core/lib/Drupal/Core/EventSubscriber/MainContentViewSubscriber.php(90): Drupal\Core\Render\MainContent\HtmlRenderer->renderResponse() #17 [internal function]: Drupal\Core\EventSubscriber\MainContentViewSubscriber->onViewRenderArray() #18 /var/www/html/core/lib/Drupal/Component/EventDispatcher/ContainerAwareEventDispatcher.php(142): call_user_func() #19 /var/www/html/vendor/symfony/http-kernel/HttpKernel.php(174): Drupal\Component\EventDispatcher\ContainerAwareEventDispatcher->dispatch() #20 /var/www/html/vendor/symfony/http-kernel/HttpKernel.php(81): Symfony\Component\HttpKernel\HttpKernel->handleRaw() #21 /var/www/html/core/lib/Drupal/Core/StackMiddleware/Session.php(58): Symfony\Component\HttpKernel\HttpKernel->handle() #22 /var/www/html/core/lib/Drupal/Core/StackMiddleware/KernelPreHandle.php(48): Drupal\Core\StackMiddleware\Session->handle() #23 /var/www/html/core/modules/page_cache/src/StackMiddleware/PageCache.php(106): Drupal\Core\StackMiddleware\KernelPreHandle->handle() #24 /var/www/html/core/modules/page_cache/src/StackMiddleware/PageCache.php(85): Drupal\page_cache\StackMiddleware\PageCache->pass() #25 /var/www/html/core/lib/Drupal/Core/StackMiddleware/ReverseProxyMiddleware.php(48): Drupal\page_cache\StackMiddleware\PageCache->handle() #26 /var/www/html/core/lib/Drupal/Core/StackMiddleware/NegotiationMiddleware.php(51): Drupal\Core\StackMiddleware\ReverseProxyMiddleware->handle() #27 /var/www/html/vendor/stack/builder/src/Stack/StackedHttpKernel.php(23): Drupal\Core\StackMiddleware\NegotiationMiddleware->handle() #28 /var/www/html/core/lib/Drupal/Core/DrupalKernel.php(718): Stack\StackedHttpKernel->handle() #29 /var/www/html/index.php(19): Drupal\Core\DrupalKernel->handle() #30 {main}

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It's likely this issue predates Contrib.social: some issue and comment data are missing.

Assigned to abhishek_virasat
Comment 7 months ago →
🇮🇳India abhishek_virasat
First commit to issue fork.
Status changed to Closed: works as designed 7 months ago2:35pm 12 December 2023
Comment 7 months ago →
🇵🇹Portugal rfmarcelino
@london6339, this is not a bug of bibcite_import_orcid, bit related with the version of bibcite → you're using.
Likely, you're using version 2 with PHP8. Upgrade to version 3 and the problem will go away.
Comment 7 months ago →
london6339
Thanks for clarifying @rfmarcelino.

I have updated PHP and tried to update to 3.0 and 3.0 dev, but seems like another issue has occurred with bibcite.
Comment 7 months ago →
🇵🇹Portugal rfmarcelino
You need to run a drush updb or visit /update.php after upgrading.

Comment 7 months ago →

london6339

I have ran drush updb already and it said no pending updates, but when I try to rebuild cache I get this error:

PHP Fatal error:  Declaration of Drupal\bibcite_entity\Normalizer\CslReferenceNormalizer::supportsDenormalization($data, string $type, ?string $format = null, array $context = []): bool must be compatible with Drupal\serialization\Normalizer\NormalizerBase::supportsDenormalization($data, $type, $format = null) in /var/www/html/modules/contrib/bibcite/modules/bibcite_entity/src/Normalizer/CslReferenceNormalizer.php on line 28
 [warning] Drush command terminated abnormally.

Comment 7 months ago →
🇵🇹Portugal rfmarcelino
Never saw that one :)
I saw that you opened an issue in the bibcite project. Hope you manage to sort it out.

Comment 7 months ago →

london6339

Actually, do you think #1 is caused by this during import?

Warning: Undefined array key "doi" in Drupal\bibcite_import_orcid\Process->prepImportOrcid() (line 51 of /var/www/html/modules/contrib/bibcite_import_orcid/src/Process.php)

#0 /var/www/html/core/includes/bootstrap.inc(347): _drupal_error_handler_real()
#1 /var/www/html/modules/contrib/bibcite_import_orcid/src/Process.php(51): _drupal_error_handler()
#2 /var/www/html/modules/contrib/bibcite_import_orcid/bibcite_import_orcid.batch.inc(18): Drupal\bibcite_import_orcid\Process->prepImportOrcid()
#3 /var/www/html/core/includes/batch.inc(295): bibcite_prep_import_orcid_batch()
#4 /var/www/html/core/includes/batch.inc(137): _batch_process()
#5 /var/www/html/core/includes/batch.inc(93): _batch_do()
#6 /var/www/html/core/modules/system/src/Controller/BatchController.php(55): _batch_page()
#7 [internal function]: Drupal\system\Controller\BatchController->batchPage()
#8 /var/www/html/core/lib/Drupal/Core/EventSubscriber/EarlyRenderingControllerWrapperSubscriber.php(123): call_user_func_array()
#9 /var/www/html/core/lib/Drupal/Core/Render/Renderer.php(580): Drupal\Core\EventSubscriber\EarlyRenderingControllerWrapperSubscriber->Drupal\Core\EventSubscriber\{closure}()
#10 /var/www/html/core/lib/Drupal/Core/EventSubscriber/EarlyRenderingControllerWrapperSubscriber.php(124): Drupal\Core\Render\Renderer->executeInRenderContext()
#11 /var/www/html/core/lib/Drupal/Core/EventSubscriber/EarlyRenderingControllerWrapperSubscriber.php(97): Drupal\Core\EventSubscriber\EarlyRenderingControllerWrapperSubscriber->wrapControllerExecutionInRenderContext()
#12 /var/www/html/vendor/symfony/http-kernel/HttpKernel.php(169): Drupal\Core\EventSubscriber\EarlyRenderingControllerWrapperSubscriber->Drupal\Core\EventSubscriber\{closure}()
#13 /var/www/html/vendor/symfony/http-kernel/HttpKernel.php(81): Symfony\Component\HttpKernel\HttpKernel->handleRaw()
#14 /var/www/html/core/lib/Drupal/Core/StackMiddleware/Session.php(58): Symfony\Component\HttpKernel\HttpKernel->handle()
#15 /var/www/html/core/lib/Drupal/Core/StackMiddleware/KernelPreHandle.php(48): Drupal\Core\StackMiddleware\Session->handle()
#16 /var/www/html/core/modules/page_cache/src/StackMiddleware/PageCache.php(106): Drupal\Core\StackMiddleware\KernelPreHandle->handle()
#17 /var/www/html/core/modules/page_cache/src/StackMiddleware/PageCache.php(85): Drupal\page_cache\StackMiddleware\PageCache->pass()
#18 /var/www/html/core/lib/Drupal/Core/StackMiddleware/ReverseProxyMiddleware.php(48): Drupal\page_cache\StackMiddleware\PageCache->handle()
#19 /var/www/html/core/lib/Drupal/Core/StackMiddleware/NegotiationMiddleware.php(51): Drupal\Core\StackMiddleware\ReverseProxyMiddleware->handle()
#20 /var/www/html/vendor/stack/builder/src/Stack/StackedHttpKernel.php(23): Drupal\Core\StackMiddleware\NegotiationMiddleware->handle()
#21 /var/www/html/core/lib/Drupal/Core/DrupalKernel.php(718): Stack\StackedHttpKernel->handle()
#22 /var/www/html/index.php(19): Drupal\Core\DrupalKernel->handle()
#23 {main}

Comment 7 months ago →
🇵🇹Portugal rfmarcelino
That's a warning that the DOI is not available in the user profile.

To debug, you can create a reference in the UI and try to view it. I the problem persists, then has nothing to do with the import from ORCID.

Imported reference has a TypeError: arrayfilter()

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